Happening today: MSE symposium session “Reconsidering ‘One Health’ Through Microbes”

The Microbes and Social Equity working group, and The University of Maine Institute of Medicine present a virtual symposium on:

“Living in a Microbial World”

June 5 – 9th, 2023.

Format: virtual meeting, Zoom platform.

The full program is here.

Session 1: Reconsidering ‘One Health’ Through Microbes

Monday, June 5th, 11 am – 2:30 pm EST. This event has passed, watch the recorded talks.

Microbes and Social Equity concepts are based on the idea that microbes connect individuals, societies, and ecosystems. One Health & the Environment concepts are based on similar ideas of connectivity. This session will explore the connections between MSE and One Health, how microbiome research connects to One Health, and how we can broaden our own research to include other disciplines. The primary goals for this session are 1) to convene researchers in multiple disciplines and envision ways to work together, and 2) to collaboratively generate definitions of One Health & the Environment with respect to microbiomes.

Hosts and organizers:

Dr. Tiff Mak (they/she), PhD, Postdoctoral Research Fellow at the Novo Nordisk Foundation Center for Biosustainability at DTU. They work at the intersection of Microbial Ecology, Fermentation and Integrated Food Systems, and are interested in community interaction dynamics and relationality, from the scale of the microbial to the planetary.

Dr. Sue Ishaq, PhD, Assistant Professor of Animal and Veterinary Science, School of Food and Agriculture, University of Maine. Animal microbiomes, diet and gut, microbes and social equity.

Speakers, 11~12:00 EDT:

Rob Beiko, PhD

Dr. Rob Beiko, PhD., is a Professor and Head of the Algorithms and Bioinformatics research cluster in the Faculty of Computer Science at Dalhousie University. His research aims to understand microbial diversity and evolution using machine learning, phylogenetics, time-series algorithms, and visualization techniques. His group is developing software tools and pipelines to comprehensively survey genes and mobile genetic elements in bacterial genomes, and understand how these genomes have been shaped by vertical inheritance, recombination, and lateral gene transfer. He is also a co-founder of Dartmouth Ocean Techonlogies, Inc., a developer of environmental DNA sampling devices.

Marta Scaglioni

Dr. Marta Scaglioni, PhD. is a Cultural Anthropologist and holds a PostDoc position at Cà Foscari University of Venice (Italy) within the frame of the ERC Project HealthXCross. She is interested in how microbiome research operates in the African continent and how microbial data, knowledge, and funding travel across national boundaries and across a Global North/Global South axis.

Dr. Lucilla Barchetta, PhD., is a Cultural Anthropologist and PhD in Urban Studies. She currently works as Postdoctoral Fellow within the ERC project Health X Cross based at the University Ca’ Foscari of Venice, where she studies One Health epistemologies and open data governance in multidisciplinary data-centric science and collaboration.

Break, ~12:05 – 12:20 EDT

Panel Discussion, 12:20~13:00 EDT:

  • Need for interdisciplinarity and collaboration, with collection and ontological credit
  • Narrative on One Health, and thinking about other definitions of health

Break, 3:00 – 13:15 EDT

Breakout room discussions, 13:15 ~ 14:30 EDT:

  1. Microbes in One Health research
  1. Defining One Health/Conservation
  1. Teaching microbes + One Health

Related to this session, here are recorded talks from previous MSE events:

Marissa Kinney awarded an NSF NRT graduate fellowship from the UMaine Initiative for One Health and the Environment!

Masters of Science in Microbiology student, Marissa Kinney, will be joining the 2023/2024 cohort of graduate students in the Initiative for One Health and the Environment group at UMaine, as she was awarded a fellowship through the group’s NSF NRT funding. She’ll be using this fellowship to cross-train in other research disciplines, and explore the economic and social factors concerning people with Inflammatory Bowel Diseases, alongside One Health co-mentor Dr. Mario Teisl, Director and Professor of the School of Economics.

Marissa joins fellow Ishaq Lab grad student, Lola Holcomb, who was awarded a fellowship by the group and started with the 2022/2023 cohort.

Marissa Kinney

Marissa Kinney 

Master of Science student, Microbiology and Animal and Veterinary Sciences

Blurb: Marissa is a Masters student who loves learning and bench microbiology. She completed her undergraduate at the University of Maine in 2021, earning a BS in Microbiology and a BS in Cellular/Molecular Biology. She devoted a large portion of her time in undergrad to research in the laboratories of Dr. Julie Gosse and Dr. Edward Bernard. Since graduating, she worked in the field of public health at UMaine’s Margaret Chase Smith Policy Center, collecting and processing data about violent and drug-related deaths in Maine. While her role at the Center was one she loved dearly, she feels a big pull towards laboratory work and academic research. She recently joined the Ishaq lab and is excited by the new opportunities this position brings. 

Marissa was awarded a One Health and the Environment NRT Fellowship 2023 – 2024 at UMaine.

Now, working in my lab, Marissa is focusing on the microbial communities in the gastrointestinal tract, and particularly in the context of broccoli sprouts in the diet and how certain gut bacteria can use them to create an anti-inflammatory compound of interest. She has been developing new protocols for using growth curve analyses and genomic assays (quantitative PCR) to identify bacteria with the capacity to use broccoli sprouts to create anti-inflammatories along different location in the gut, and under difference health or disease states. Over the next few years, she’ll also be learning DNA sequencing library preparation and data analysis, working with human subjects in a diet trial, performing experiments using mice as a model for humans, and a variety of microbiology, genomic, and biochemical laboratory techniques. Marissa’s project is part of a much larger collaborative on the use of dietary broccoli sprouts to resolve symptoms in Inflammatory Bowel Disease patients.  As part of that larger collaboration, Marissa will be meeting regularly with the various parts of the project team, including students and researchers at 4 different institutions, and helping on three different projects in the lab to build her skillset. This requires a high degree of organization and coordination, and Marissa immediately stepped into her role.

To expand the lab’s existing work on human gut microbiomes, Marissa will use the NRT training and knowledge base as an opportunity to learn techniques in social sciences and economics. IBD is highly impactful on the wellbeing of people experiencing it acutely or chronically, and there is a large social and economic burden, as well. While any IBD patient could already consume broccoli to potentially receive benefit, nuances in how gut microbes respond to diet, and fears about exacerbating symptoms, preclude this. Being able to understand dietary behaviors, and assess the economic impact of a whole-food palliative strategy, would allow us to better implement our dietary intervention.