¹ undergraduate or ² graduate student mentored by the Ishaq Lab for this publication.

2024

1. Alaba², T.E., Holman², J.M., Ishaq, S.L., Li, Y. 2024. Current knowledge on the preparation and benefits of cruciferous vegetables as relates to in vitro, in vivo, and clinical models of Inflammatory Bowel Disease.  Current Developments in Nutrition: 102160.

2023

1. Holcomb², L., Holman², J., Hurd, M., Lavoie, B., Colucci, L., Hunt¹, B., Hunt¹, T., Kinney², M., Pathak², J., Moses, P., Mawe, G.M., Perry, E., Stratigakis, A., Zhang, T., Ishaq, S.L., Li, Y. 2023. Early life exposure to broccoli sprouts confers stronger protection against enterocolitis development in an immunological mouse model of inflammatory bowel disease. mSystems: 00688-23.
2. Ishaq, S.L., Hosler², S., Dankwa, A., Jekielek, P., Brady, D.C., Grey, E., Haskell, H., Lasley-Rasher, R., Pepperman, K., Perry, J., Beal, B., Bowden, T.J. 2023. Bacterial community trends associated with sea scallop, Placopecten magellanicus, larvae in a hatchery system. Aquaculture Reports 32: 101693.
3. Holman², J., L. Colucci, L. Baudewyns, D., Balkan¹, J., Hunt¹, T., Hunt¹, B., Kinney², M., Holcomb², L., Stratigakis, A., Chen. G., Moses, P., Mawe, G.M., Zhang, T., Li, Y., Ishaq, S.L. 2023. Steamed broccoli sprouts alleviate DSS-induced inflammation and retain gut microbial biogeography in mice. mSystems: 00532-23.
4. Ishaq, S.L., Turner, S.M., Lee¹, G., Tudor, M.S., MacRae, J.D., Hamlin, H., Bouchard, D. 2023. Water temperature and disease alters bacterial diversity and cultivability from American Lobster (Homarus americanus) shells. iScience 26(5): 106606.

2022

1.  Holman, J., Hurd, M., Moses, P.,  Mawe, G.,  Zhang, T., Ishaq, S.L., Li, Y. 2022. Interplay of Broccoli/Broccoli Sprout Bioactives with Gut Microbiota in Reducing Inflammation in Inflammatory Bowel Diseases. The Journal of Nutritional Biochemistry 113: 109238.
2. Ouverson, T., Boss, D., Eberly, J., Seipel, T.,  Menalled, F.D., Ishaq, S.L. 2022. Soil  bacterial community response to cover crops, cover crop termination, and predicted climate conditions in a dryland cropping system. Frontiers in Sustainable Food Systems. 911199.
3. Ishaq, S.L., Wissel², E.F., Wolf, P.G., Grieneisen, L., Eggleston, E.M., Mhuireach, G., Friedman, M., Lichtenwalner, A., Otero Machuca, J.,  Weatherford Darling, K.,  Pearson, A., Wertheim, F.S., Johnson, A.J., Hodges, L., Young, S., Nielsen, C.C., Kozyrskyj, A.L.,  MacRae, J.D., McKenna Myers, E., Kozik, A.J., Tussing-Humphreys, L.M., Trujillo, M., Daniel, G.A., Kramer, M.R., Donovan, S.M., Arshad ¹, M., Balkan¹, J., Hosler², S. 2022. Designing the Microbes and Social Equity Symposium, a novel interdisciplinary virtual research conference based on achieving group-directed outputs. Challenges, 13(2), 30.
4. Ishaq, S.L., Turner, S.M., Tudor, M.S., MacRae, J.D., Hamlin, H., Kilchenmann, J., Lee¹, G., Bouchard, D. 2022. Many questions remain unanswered about the role of microbial transmission in epizootic shell disease in American lobsters (Homarus americanus). Frontiers in Microbiology 13: 824950.
   • Invited contribution to special collection: The Role of Dispersal and Transmission in Structuring Microbial Communities
5. Rabee, A.E., Sayed Alahl, A.A., Lamara, M., Ishaq, S.L. 2022. Fibrolytic rumen bacteria of camel and sheep and their applications in the bioconversion of barley straw to soluble sugars for biofuel production. PLoS ONE 17(1): e0262304. 
   • Dr. Rabee will be joining my lab as a Visiting Research in 2022.
6. Robinson, J.M., Redvers, N., Camargo, A., Bosch, C.A., Breed, M.F., Brenner, L.A., Carney, M.A., Chauhan, A., Dasari, M., Dietz, L.G., Friedman, M., Grieneisen, L., Hoisington, A.J., Horve, P.F., Hunter, A., Jech, S., Jorgensen, A., Lowry, C.A., Man, I., Mhuireach, G., Navarro-Pérez, E., Ritchie, E.G., Stewart, J.D., Watkins, H., Weinstein, P., and Ishaq, S.L. 2022. Twenty important research questions in microbial exposure and social equity. mSystems 7(1): e01240-21. 
   • Invited to Special Series: Social Equity as a Means of Resolving Disparities in Microbial Exposure

2021

1. Ouverson, Laura Tindall, “Response Of Soil Bacterial Communities To Cropping Systems, Temporal Changes, And Environmental Conditions In The Northern Great Plains.” 2021. Montana State University. Pp 126.
   1. Master’s of Science in Land Resources and Environmental Sciences, Advisors: Drs. Fabian Menalled and Tim Seipel
2. Ishaq, S.L., Parada, F.J., Wolf, P.G., Bonilla, C.Y., Carney, M.A., Benezra, A., Wissel, E., Friedman, M., DeAngelis, K.M., Robinson, J.M., Fahimipour, A.K., Manus, M.B., Grieneisen, L., Dietz, L.G., Pathak, A., Chauhan, A., Kuthyar, S., Stewart, J.D., Dasari, M.R., Nonnamaker, E., Choudoir, M., Horve, P.F., Zimmerman, N.B., Kozik, A.J., Darling, K.W., Romero-Olivares, A.L., Hariharan, J., Farmer, N., Maki, K.A., Collier, J.L., O’Doherty, K., Letourneau, J., Kline, J., Moses, P.L., Morar, N. 2021.  Introducing the Microbes and Social Equity Working Group: Considering the Microbial Components of Social, Environmental, and Health Justice. mSystems 6:4. Special Series: Social Equity as a Means of Resolving Disparities in Microbial Exposure
3. Dankwa², A.S., U. Humagain², S.L. Ishaq, C.J. Yeoman, S. Clark , D.C. Beitz, and E. D. Testroet. 2021. Determination of the microbial community in the rumen and fecal matter of lactating dairy cows fed on reduced-fat dried distillers grains with solubles. Animal 15(7):100281. Article.
4. Ishaq, S.L., A. Hotopp², S. Silverbrand², J.E. Dumont, A. Michaud, J. MacRae, S. P. Stock, E. Groden. 2021. Bacterial transfer from Pristionchus entomophagus nematodes to the invasive ant Myrmica rubra and the potential for colony mortality in coastal Maine. iScience 24(6):102663. Article.
5. Ouverson², T.,  Eberly, J., Seipel, T., Menalled, F., Ishaq, S.L. 2021.Temporal soil bacterial community responses to cropping systems and crop identity in dryland agroecosystems of the Northern Great Plains.  Frontiers in Sustainable Food Systems 5:75. Article.
   1. Invited submission to Plant Growth-Promoting Microorganisms for Sustainable Agricultural Production  special collection.